mirror of
https://github.com/seaweedfs/seaweedfs.git
synced 2024-01-19 02:48:24 +00:00
Volume fsck by volume (#3851)
* refactor * refactor args verbose and writer * refactor readFilerFileIdFile * fix filter by collectMtime * skip system log collection
This commit is contained in:
Konstantin Lebedev
GitHub
parent
9c8678ded9
commit
f19c9e3d9d
|
|
@ -26,7 +26,6 @@ import (
|
|||
"os"
|
||||
"path"
|
||||
"path/filepath"
|
||||
"strings"
|
||||
"sync"
|
||||
"time"
|
||||
)
|
||||
|
|
@ -36,8 +35,15 @@ func init() {
|
|||
}
|
||||
|
||||
type commandVolumeFsck struct {
|
||||
env *CommandEnv
|
||||
forcePurging *bool
|
||||
env *CommandEnv
|
||||
writer io.Writer
|
||||
bucketsPath string
|
||||
collection *string
|
||||
volumeId *uint
|
||||
tempFolder string
|
||||
verbose *bool
|
||||
forcePurging *bool
|
||||
findMissingChunksInFiler *bool
|
||||
}
|
||||
|
||||
func (c *commandVolumeFsck) Name() string {
|
||||
|
|
@ -67,10 +73,10 @@ func (c *commandVolumeFsck) Help() string {
|
|||
func (c *commandVolumeFsck) Do(args []string, commandEnv *CommandEnv, writer io.Writer) (err error) {
|
||||
|
||||
fsckCommand := flag.NewFlagSet(c.Name(), flag.ContinueOnError)
|
||||
verbose := fsckCommand.Bool("v", false, "verbose mode")
|
||||
findMissingChunksInFiler := fsckCommand.Bool("findMissingChunksInFiler", false, "see \"help volume.fsck\"")
|
||||
findMissingChunksInFilerPath := fsckCommand.String("findMissingChunksInFilerPath", "/", "used together with findMissingChunksInFiler")
|
||||
findMissingChunksInVolumeId := fsckCommand.Int("findMissingChunksInVolumeId", 0, "used together with findMissingChunksInFiler")
|
||||
c.verbose = fsckCommand.Bool("v", false, "verbose mode")
|
||||
c.findMissingChunksInFiler = fsckCommand.Bool("findMissingChunksInFiler", false, "see \"help volume.fsck\"")
|
||||
c.collection = fsckCommand.String("collection", "", "the collection name")
|
||||
c.volumeId = fsckCommand.Uint("volumeId", 0, "the volume id")
|
||||
applyPurging := fsckCommand.Bool("reallyDeleteFromVolume", false, "<expert only!> after detection, delete missing data from volumes / delete missing file entries from filer. Currently this only works with default filerGroup.")
|
||||
c.forcePurging = fsckCommand.Bool("forcePurging", false, "delete missing data from volumes in one replica used together with applyPurging")
|
||||
purgeAbsent := fsckCommand.Bool("reallyDeleteFilerEntries", false, "<expert only!> delete missing file entries from filer if the corresponding volume is missing for any reason, please ensure all still existing/expected volumes are connected! used together with findMissingChunksInFiler")
|
||||
|
|
@ -86,76 +92,78 @@ func (c *commandVolumeFsck) Do(args []string, commandEnv *CommandEnv, writer io.
|
|||
}
|
||||
|
||||
c.env = commandEnv
|
||||
c.writer = writer
|
||||
|
||||
// create a temp folder
|
||||
tempFolder, err := os.MkdirTemp(*tempPath, "sw_fsck")
|
||||
if err != nil {
|
||||
return fmt.Errorf("failed to create temp folder: %v", err)
|
||||
}
|
||||
if *verbose {
|
||||
fmt.Fprintf(writer, "working directory: %s\n", tempFolder)
|
||||
}
|
||||
defer os.RemoveAll(tempFolder)
|
||||
|
||||
// collect all volume id locations
|
||||
dataNodeVolumeIdToVInfo, err := c.collectVolumeIds(commandEnv, *verbose, writer)
|
||||
if err != nil {
|
||||
return fmt.Errorf("failed to collect all volume locations: %v", err)
|
||||
}
|
||||
|
||||
isBucketsPath := false
|
||||
var fillerBucketsPath string
|
||||
if *findMissingChunksInFiler && *findMissingChunksInFilerPath != "/" {
|
||||
fillerBucketsPath, err = readFilerBucketsPath(commandEnv)
|
||||
if err != nil {
|
||||
return fmt.Errorf("read filer buckets path: %v", err)
|
||||
}
|
||||
if strings.HasPrefix(*findMissingChunksInFilerPath, fillerBucketsPath) {
|
||||
isBucketsPath = true
|
||||
}
|
||||
}
|
||||
c.bucketsPath, err = readFilerBucketsPath(commandEnv)
|
||||
if err != nil {
|
||||
return fmt.Errorf("read filer buckets path: %v", err)
|
||||
}
|
||||
|
||||
collectMtime := time.Now().Unix()
|
||||
// create a temp folder
|
||||
c.tempFolder, err = os.MkdirTemp(*tempPath, "sw_fsck")
|
||||
if err != nil {
|
||||
return fmt.Errorf("failed to create temp folder: %v", err)
|
||||
}
|
||||
if *c.verbose {
|
||||
fmt.Fprintf(c.writer, "working directory: %s\n", c.tempFolder)
|
||||
}
|
||||
defer os.RemoveAll(c.tempFolder)
|
||||
|
||||
// collect all volume id locations
|
||||
dataNodeVolumeIdToVInfo, err := c.collectVolumeIds()
|
||||
if err != nil {
|
||||
return fmt.Errorf("failed to collect all volume locations: %v", err)
|
||||
}
|
||||
|
||||
if err != nil {
|
||||
return fmt.Errorf("read filer buckets path: %v", err)
|
||||
}
|
||||
|
||||
collectMtime := time.Now().UnixNano()
|
||||
// collect each volume file ids
|
||||
for dataNodeId, volumeIdToVInfo := range dataNodeVolumeIdToVInfo {
|
||||
for volumeId, vinfo := range volumeIdToVInfo {
|
||||
if *findMissingChunksInVolumeId > 0 && uint32(*findMissingChunksInVolumeId) != volumeId {
|
||||
if *c.volumeId > 0 && uint32(*c.volumeId) != volumeId {
|
||||
delete(volumeIdToVInfo, volumeId)
|
||||
continue
|
||||
}
|
||||
if isBucketsPath && !strings.HasPrefix(*findMissingChunksInFilerPath, fillerBucketsPath+"/"+vinfo.collection) {
|
||||
// or skip /topics/.system/log without collection name
|
||||
if (*c.collection != "" && vinfo.collection != *c.collection) || vinfo.collection == "" {
|
||||
delete(volumeIdToVInfo, volumeId)
|
||||
continue
|
||||
}
|
||||
if *c.volumeId > 0 && *c.collection == "" {
|
||||
*c.collection = vinfo.collection
|
||||
}
|
||||
cutoffFrom := time.Now().Add(-*cutoffTimeAgo).UnixNano()
|
||||
err = c.collectOneVolumeFileIds(tempFolder, dataNodeId, volumeId, vinfo, *verbose, writer, uint64(cutoffFrom))
|
||||
err = c.collectOneVolumeFileIds(dataNodeId, volumeId, vinfo, uint64(cutoffFrom))
|
||||
if err != nil {
|
||||
return fmt.Errorf("failed to collect file ids from volume %d on %s: %v", volumeId, vinfo.server, err)
|
||||
}
|
||||
}
|
||||
if *c.verbose {
|
||||
fmt.Fprintf(c.writer, "dn %+v filtred %d volumes and locations.\n", dataNodeId, len(dataNodeVolumeIdToVInfo[dataNodeId]))
|
||||
}
|
||||
}
|
||||
|
||||
if *findMissingChunksInFiler {
|
||||
if *c.findMissingChunksInFiler {
|
||||
// collect all filer file ids and paths
|
||||
if err = c.collectFilerFileIdAndPaths(dataNodeVolumeIdToVInfo, tempFolder, writer, *findMissingChunksInFilerPath, *verbose, *purgeAbsent, collectMtime); err != nil {
|
||||
if err = c.collectFilerFileIdAndPaths(dataNodeVolumeIdToVInfo, *purgeAbsent, collectMtime); err != nil {
|
||||
return fmt.Errorf("collectFilerFileIdAndPaths: %v", err)
|
||||
}
|
||||
for dataNodeId, volumeIdToVInfo := range dataNodeVolumeIdToVInfo {
|
||||
// for each volume, check filer file ids
|
||||
if err = c.findFilerChunksMissingInVolumeServers(volumeIdToVInfo, tempFolder, dataNodeId, writer, *verbose, *applyPurging); err != nil {
|
||||
if err = c.findFilerChunksMissingInVolumeServers(volumeIdToVInfo, dataNodeId, *applyPurging); err != nil {
|
||||
return fmt.Errorf("findFilerChunksMissingInVolumeServers: %v", err)
|
||||
}
|
||||
}
|
||||
} else {
|
||||
// collect all filer file ids
|
||||
if err = c.collectFilerFileIds(dataNodeVolumeIdToVInfo, tempFolder, writer, *verbose); err != nil {
|
||||
if err = c.collectFilerFileIdAndPaths(dataNodeVolumeIdToVInfo, false, collectMtime); err != nil {
|
||||
return fmt.Errorf("failed to collect file ids from filer: %v", err)
|
||||
}
|
||||
// volume file ids subtract filer file ids
|
||||
if err = c.findExtraChunksInVolumeServers(dataNodeVolumeIdToVInfo, tempFolder, writer, *verbose, *applyPurging); err != nil {
|
||||
if err = c.findExtraChunksInVolumeServers(dataNodeVolumeIdToVInfo, *applyPurging); err != nil {
|
||||
return fmt.Errorf("findExtraChunksInVolumeServers: %v", err)
|
||||
}
|
||||
}
|
||||
|
|
@ -163,10 +171,9 @@ func (c *commandVolumeFsck) Do(args []string, commandEnv *CommandEnv, writer io.
|
|||
return nil
|
||||
}
|
||||
|
||||
func (c *commandVolumeFsck) collectFilerFileIdAndPaths(dataNodeVolumeIdToVInfo map[string]map[uint32]VInfo, tempFolder string, writer io.Writer, filerPath string, verbose bool, purgeAbsent bool, collectMtime int64) error {
|
||||
|
||||
if verbose {
|
||||
fmt.Fprintf(writer, "checking each file from filer ...\n")
|
||||
func (c *commandVolumeFsck) collectFilerFileIdAndPaths(dataNodeVolumeIdToVInfo map[string]map[uint32]VInfo, purgeAbsent bool, collectMtime int64) error {
|
||||
if *c.verbose {
|
||||
fmt.Fprintf(c.writer, "checking each file from filer path %s...\n", c.getCollectFilerFilePath())
|
||||
}
|
||||
|
||||
files := make(map[uint32]*os.File)
|
||||
|
|
@ -175,9 +182,9 @@ func (c *commandVolumeFsck) collectFilerFileIdAndPaths(dataNodeVolumeIdToVInfo m
|
|||
if _, ok := files[vid]; ok {
|
||||
continue
|
||||
}
|
||||
dst, openErr := os.OpenFile(getFilerFileIdFile(tempFolder, vid), os.O_WRONLY|os.O_CREATE|os.O_TRUNC, 0644)
|
||||
dst, openErr := os.OpenFile(getFilerFileIdFile(c.tempFolder, vid), os.O_WRONLY|os.O_CREATE|os.O_TRUNC, 0644)
|
||||
if openErr != nil {
|
||||
return fmt.Errorf("failed to create file %s: %v", getFilerFileIdFile(tempFolder, vid), openErr)
|
||||
return fmt.Errorf("failed to create file %s: %v", getFilerFileIdFile(c.tempFolder, vid), openErr)
|
||||
}
|
||||
files[vid] = dst
|
||||
}
|
||||
|
|
@ -188,60 +195,54 @@ func (c *commandVolumeFsck) collectFilerFileIdAndPaths(dataNodeVolumeIdToVInfo m
|
|||
}
|
||||
}()
|
||||
|
||||
type Item struct {
|
||||
vid uint32
|
||||
fileKey uint64
|
||||
cookie uint32
|
||||
path util.FullPath
|
||||
}
|
||||
return doTraverseBfsAndSaving(c.env, nil, filerPath, false, func(entry *filer_pb.FullEntry, outputChan chan interface{}) (err error) {
|
||||
if verbose && entry.Entry.IsDirectory {
|
||||
fmt.Fprintf(writer, "checking directory %s\n", util.NewFullPath(entry.Dir, entry.Entry.Name))
|
||||
}
|
||||
dataChunks, manifestChunks, resolveErr := filer.ResolveChunkManifest(filer.LookupFn(c.env), entry.Entry.Chunks, 0, math.MaxInt64)
|
||||
if resolveErr != nil {
|
||||
return nil
|
||||
}
|
||||
dataChunks = append(dataChunks, manifestChunks...)
|
||||
for _, chunk := range dataChunks {
|
||||
if chunk.Mtime > collectMtime {
|
||||
continue
|
||||
return doTraverseBfsAndSaving(c.env, nil, c.getCollectFilerFilePath(), false,
|
||||
func(entry *filer_pb.FullEntry, outputChan chan interface{}) (err error) {
|
||||
if *c.verbose && entry.Entry.IsDirectory {
|
||||
fmt.Fprintf(c.writer, "checking directory %s\n", util.NewFullPath(entry.Dir, entry.Entry.Name))
|
||||
}
|
||||
outputChan <- &Item{
|
||||
vid: chunk.Fid.VolumeId,
|
||||
fileKey: chunk.Fid.FileKey,
|
||||
cookie: chunk.Fid.Cookie,
|
||||
path: util.NewFullPath(entry.Dir, entry.Entry.Name),
|
||||
dataChunks, manifestChunks, resolveErr := filer.ResolveChunkManifest(filer.LookupFn(c.env), entry.Entry.Chunks, 0, math.MaxInt64)
|
||||
if resolveErr != nil {
|
||||
return fmt.Errorf("failed to ResolveChunkManifest: %+v", resolveErr)
|
||||
}
|
||||
}
|
||||
return nil
|
||||
}, func(outputChan chan interface{}) {
|
||||
buffer := make([]byte, 16)
|
||||
for item := range outputChan {
|
||||
i := item.(*Item)
|
||||
if f, ok := files[i.vid]; ok {
|
||||
util.Uint64toBytes(buffer, i.fileKey)
|
||||
util.Uint32toBytes(buffer[8:], i.cookie)
|
||||
util.Uint32toBytes(buffer[12:], uint32(len(i.path)))
|
||||
f.Write(buffer)
|
||||
f.Write([]byte(i.path))
|
||||
// fmt.Fprintf(writer, "%d,%x%08x %d %s\n", i.vid, i.fileKey, i.cookie, len(i.path), i.path)
|
||||
} else {
|
||||
fmt.Fprintf(writer, "%d,%x%08x %s volume not found\n", i.vid, i.fileKey, i.cookie, i.path)
|
||||
if purgeAbsent {
|
||||
fmt.Printf("deleting path %s after volume not found", i.path)
|
||||
c.httpDelete(i.path, verbose)
|
||||
dataChunks = append(dataChunks, manifestChunks...)
|
||||
for _, chunk := range dataChunks {
|
||||
if chunk.Mtime > collectMtime {
|
||||
continue
|
||||
}
|
||||
outputChan <- &Item{
|
||||
vid: chunk.Fid.VolumeId,
|
||||
fileKey: chunk.Fid.FileKey,
|
||||
cookie: chunk.Fid.Cookie,
|
||||
path: util.NewFullPath(entry.Dir, entry.Entry.Name),
|
||||
}
|
||||
}
|
||||
}
|
||||
})
|
||||
|
||||
return nil
|
||||
},
|
||||
func(outputChan chan interface{}) {
|
||||
buffer := make([]byte, 16)
|
||||
for item := range outputChan {
|
||||
i := item.(*Item)
|
||||
if f, ok := files[i.vid]; ok {
|
||||
util.Uint64toBytes(buffer, i.fileKey)
|
||||
util.Uint32toBytes(buffer[8:], i.cookie)
|
||||
util.Uint32toBytes(buffer[12:], uint32(len(i.path)))
|
||||
f.Write(buffer)
|
||||
f.Write([]byte(i.path))
|
||||
} else if *c.findMissingChunksInFiler && *c.volumeId == 0 {
|
||||
fmt.Fprintf(c.writer, "%d,%x%08x %s volume not found\n", i.vid, i.fileKey, i.cookie, i.path)
|
||||
if purgeAbsent {
|
||||
fmt.Printf("deleting path %s after volume not found", i.path)
|
||||
c.httpDelete(i.path)
|
||||
}
|
||||
}
|
||||
}
|
||||
})
|
||||
}
|
||||
|
||||
func (c *commandVolumeFsck) findFilerChunksMissingInVolumeServers(volumeIdToVInfo map[uint32]VInfo, tempFolder string, dataNodeId string, writer io.Writer, verbose bool, applyPurging bool) error {
|
||||
func (c *commandVolumeFsck) findFilerChunksMissingInVolumeServers(volumeIdToVInfo map[uint32]VInfo, dataNodeId string, applyPurging bool) error {
|
||||
|
||||
for volumeId, vinfo := range volumeIdToVInfo {
|
||||
checkErr := c.oneVolumeFileIdsCheckOneVolume(tempFolder, dataNodeId, volumeId, writer, verbose, applyPurging)
|
||||
checkErr := c.oneVolumeFileIdsCheckOneVolume(dataNodeId, volumeId, applyPurging)
|
||||
if checkErr != nil {
|
||||
return fmt.Errorf("failed to collect file ids from volume %d on %s: %v", volumeId, vinfo.server, checkErr)
|
||||
}
|
||||
|
|
@ -249,7 +250,7 @@ func (c *commandVolumeFsck) findFilerChunksMissingInVolumeServers(volumeIdToVInf
|
|||
return nil
|
||||
}
|
||||
|
||||
func (c *commandVolumeFsck) findExtraChunksInVolumeServers(dataNodeVolumeIdToVInfo map[string]map[uint32]VInfo, tempFolder string, writer io.Writer, verbose bool, applyPurging bool) error {
|
||||
func (c *commandVolumeFsck) findExtraChunksInVolumeServers(dataNodeVolumeIdToVInfo map[string]map[uint32]VInfo, applyPurging bool) error {
|
||||
|
||||
var totalInUseCount, totalOrphanChunkCount, totalOrphanDataSize uint64
|
||||
volumeIdOrphanFileIds := make(map[uint32]map[string]bool)
|
||||
|
|
@ -259,7 +260,7 @@ func (c *commandVolumeFsck) findExtraChunksInVolumeServers(dataNodeVolumeIdToVIn
|
|||
serverReplicas := make(map[uint32][]pb.ServerAddress)
|
||||
for dataNodeId, volumeIdToVInfo := range dataNodeVolumeIdToVInfo {
|
||||
for volumeId, vinfo := range volumeIdToVInfo {
|
||||
inUseCount, orphanFileIds, orphanDataSize, checkErr := c.oneVolumeFileIdsSubtractFilerFileIds(tempFolder, dataNodeId, volumeId, writer, verbose)
|
||||
inUseCount, orphanFileIds, orphanDataSize, checkErr := c.oneVolumeFileIdsSubtractFilerFileIds(dataNodeId, volumeId, vinfo.collection)
|
||||
if checkErr != nil {
|
||||
return fmt.Errorf("failed to collect file ids from volume %d on %s: %v", volumeId, vinfo.server, checkErr)
|
||||
}
|
||||
|
|
@ -282,9 +283,9 @@ func (c *commandVolumeFsck) findExtraChunksInVolumeServers(dataNodeVolumeIdToVIn
|
|||
totalOrphanChunkCount += uint64(len(orphanFileIds))
|
||||
totalOrphanDataSize += orphanDataSize
|
||||
|
||||
if verbose {
|
||||
if *c.verbose {
|
||||
for _, fid := range orphanFileIds {
|
||||
fmt.Fprintf(writer, "%s\n", fid)
|
||||
fmt.Fprintf(c.writer, "%s\n", fid)
|
||||
}
|
||||
}
|
||||
isEcVolumeReplicas[volumeId] = vinfo.isEcVolume
|
||||
|
|
@ -307,12 +308,12 @@ func (c *commandVolumeFsck) findExtraChunksInVolumeServers(dataNodeVolumeIdToVIn
|
|||
if !(len(orphanFileIds) > 0) {
|
||||
continue
|
||||
}
|
||||
if verbose {
|
||||
fmt.Fprintf(writer, "purging process for volume %d.\n", volumeId)
|
||||
if *c.verbose {
|
||||
fmt.Fprintf(c.writer, "purging process for volume %d.\n", volumeId)
|
||||
}
|
||||
|
||||
if isEcVolumeReplicas[volumeId] {
|
||||
fmt.Fprintf(writer, "skip purging for Erasure Coded volume %d.\n", volumeId)
|
||||
fmt.Fprintf(c.writer, "skip purging for Erasure Coded volume %d.\n", volumeId)
|
||||
continue
|
||||
}
|
||||
for _, server := range serverReplicas[volumeId] {
|
||||
|
|
@ -323,17 +324,17 @@ func (c *commandVolumeFsck) findExtraChunksInVolumeServers(dataNodeVolumeIdToVIn
|
|||
if err != nil {
|
||||
return fmt.Errorf("mark volume %d read/write: %v", volumeId, err)
|
||||
}
|
||||
|
||||
fmt.Fprintf(writer, "temporarily marked %d on server %v writable for forced purge\n", volumeId, server)
|
||||
fmt.Fprintf(c.writer, "temporarily marked %d on server %v writable for forced purge\n", volumeId, server)
|
||||
defer markVolumeWritable(c.env.option.GrpcDialOption, needleVID, server, false)
|
||||
|
||||
fmt.Fprintf(writer, "marked %d on server %v writable for forced purge\n", volumeId, server)
|
||||
}
|
||||
if verbose {
|
||||
fmt.Fprintf(writer, "purging files from volume %d\n", volumeId)
|
||||
fmt.Fprintf(c.writer, "marked %d on server %v writable for forced purge\n", volumeId, server)
|
||||
}
|
||||
|
||||
if err := c.purgeFileIdsForOneVolume(volumeId, orphanFileIds, writer); err != nil {
|
||||
if *c.verbose {
|
||||
fmt.Fprintf(c.writer, "purging files from volume %d\n", volumeId)
|
||||
}
|
||||
|
||||
if err := c.purgeFileIdsForOneVolume(volumeId, orphanFileIds); err != nil {
|
||||
return fmt.Errorf("purging volume %d: %v", volumeId, err)
|
||||
}
|
||||
}
|
||||
|
|
@ -342,203 +343,161 @@ func (c *commandVolumeFsck) findExtraChunksInVolumeServers(dataNodeVolumeIdToVIn
|
|||
|
||||
if !applyPurging {
|
||||
pct := float64(totalOrphanChunkCount*100) / (float64(totalOrphanChunkCount + totalInUseCount))
|
||||
fmt.Fprintf(writer, "\nTotal\t\tentries:%d\torphan:%d\t%.2f%%\t%dB\n",
|
||||
fmt.Fprintf(c.writer, "\nTotal\t\tentries:%d\torphan:%d\t%.2f%%\t%dB\n",
|
||||
totalOrphanChunkCount+totalInUseCount, totalOrphanChunkCount, pct, totalOrphanDataSize)
|
||||
|
||||
fmt.Fprintf(writer, "This could be normal if multiple filers or no filers are used.\n")
|
||||
fmt.Fprintf(c.writer, "This could be normal if multiple filers or no filers are used.\n")
|
||||
}
|
||||
|
||||
if totalOrphanChunkCount == 0 {
|
||||
fmt.Fprintf(writer, "no orphan data\n")
|
||||
//return nil
|
||||
fmt.Fprintf(c.writer, "no orphan data\n")
|
||||
}
|
||||
|
||||
return nil
|
||||
}
|
||||
|
||||
func (c *commandVolumeFsck) collectOneVolumeFileIds(tempFolder string, dataNodeId string, volumeId uint32, vinfo VInfo, verbose bool, writer io.Writer, cutoffFrom uint64) error {
|
||||
func (c *commandVolumeFsck) collectOneVolumeFileIds(dataNodeId string, volumeId uint32, vinfo VInfo, cutoffFrom uint64) error {
|
||||
|
||||
if verbose {
|
||||
fmt.Fprintf(writer, "collecting volume %d file ids from %s ...\n", volumeId, vinfo.server)
|
||||
if *c.verbose {
|
||||
fmt.Fprintf(c.writer, "collecting volume %d file ids from %s ...\n", volumeId, vinfo.server)
|
||||
}
|
||||
|
||||
return operation.WithVolumeServerClient(false, vinfo.server, c.env.option.GrpcDialOption, func(volumeServerClient volume_server_pb.VolumeServerClient) error {
|
||||
|
||||
ext := ".idx"
|
||||
if vinfo.isEcVolume {
|
||||
ext = ".ecx"
|
||||
}
|
||||
|
||||
copyFileClient, err := volumeServerClient.CopyFile(context.Background(), &volume_server_pb.CopyFileRequest{
|
||||
VolumeId: volumeId,
|
||||
Ext: ext,
|
||||
CompactionRevision: math.MaxUint32,
|
||||
StopOffset: math.MaxInt64,
|
||||
Collection: vinfo.collection,
|
||||
IsEcVolume: vinfo.isEcVolume,
|
||||
IgnoreSourceFileNotFound: false,
|
||||
})
|
||||
if err != nil {
|
||||
return fmt.Errorf("failed to start copying volume %d%s: %v", volumeId, ext, err)
|
||||
}
|
||||
|
||||
var buf bytes.Buffer
|
||||
for {
|
||||
resp, err := copyFileClient.Recv()
|
||||
if errors.Is(err, io.EOF) {
|
||||
break
|
||||
return operation.WithVolumeServerClient(false, vinfo.server, c.env.option.GrpcDialOption,
|
||||
func(volumeServerClient volume_server_pb.VolumeServerClient) error {
|
||||
ext := ".idx"
|
||||
if vinfo.isEcVolume {
|
||||
ext = ".ecx"
|
||||
}
|
||||
if err != nil {
|
||||
return err
|
||||
}
|
||||
buf.Write(resp.FileContent)
|
||||
}
|
||||
fileredBuf := filterDeletedNeedleFromIdx(buf.Bytes())
|
||||
if vinfo.isReadOnly == false {
|
||||
index, err := idx.FirstInvalidIndex(fileredBuf.Bytes(), func(key types.NeedleId, offset types.Offset, size types.Size) (bool, error) {
|
||||
resp, err := volumeServerClient.ReadNeedleMeta(context.Background(), &volume_server_pb.ReadNeedleMetaRequest{
|
||||
VolumeId: volumeId,
|
||||
NeedleId: uint64(key),
|
||||
Offset: offset.ToActualOffset(),
|
||||
Size: int32(size),
|
||||
})
|
||||
if err != nil {
|
||||
return false, fmt.Errorf("to read needle meta with id %d from volume %d with error %v", key, volumeId, err)
|
||||
}
|
||||
return resp.LastModified <= cutoffFrom, nil
|
||||
|
||||
copyFileClient, err := volumeServerClient.CopyFile(context.Background(), &volume_server_pb.CopyFileRequest{
|
||||
VolumeId: volumeId,
|
||||
Ext: ext,
|
||||
CompactionRevision: math.MaxUint32,
|
||||
StopOffset: math.MaxInt64,
|
||||
Collection: vinfo.collection,
|
||||
IsEcVolume: vinfo.isEcVolume,
|
||||
IgnoreSourceFileNotFound: false,
|
||||
})
|
||||
if err != nil {
|
||||
fmt.Fprintf(writer, "Failed to search for last valid index on volume %d with error %v", volumeId, err)
|
||||
} else {
|
||||
fileredBuf.Truncate(index * types.NeedleMapEntrySize)
|
||||
return fmt.Errorf("failed to start copying volume %d%s: %v", volumeId, ext, err)
|
||||
}
|
||||
}
|
||||
idxFilename := getVolumeFileIdFile(tempFolder, dataNodeId, volumeId)
|
||||
err = writeToFile(fileredBuf.Bytes(), idxFilename)
|
||||
if err != nil {
|
||||
return fmt.Errorf("failed to copy %d%s from %s: %v", volumeId, ext, vinfo.server, err)
|
||||
}
|
||||
|
||||
return nil
|
||||
})
|
||||
|
||||
}
|
||||
|
||||
func (c *commandVolumeFsck) collectFilerFileIds(dataNodeVolumeIdToVInfo map[string]map[uint32]VInfo, tempFolder string, writer io.Writer, verbose bool) error {
|
||||
|
||||
if verbose {
|
||||
fmt.Fprintf(writer, "collecting file ids from filer ...\n")
|
||||
}
|
||||
|
||||
files := make(map[uint32]*os.File)
|
||||
for _, volumeIdToServer := range dataNodeVolumeIdToVInfo {
|
||||
for vid := range volumeIdToServer {
|
||||
dst, openErr := os.OpenFile(getFilerFileIdFile(tempFolder, vid), os.O_WRONLY|os.O_CREATE|os.O_TRUNC, 0644)
|
||||
if openErr != nil {
|
||||
return fmt.Errorf("failed to create file %s: %v", getFilerFileIdFile(tempFolder, vid), openErr)
|
||||
var buf bytes.Buffer
|
||||
for {
|
||||
resp, err := copyFileClient.Recv()
|
||||
if errors.Is(err, io.EOF) {
|
||||
break
|
||||
}
|
||||
if err != nil {
|
||||
return err
|
||||
}
|
||||
buf.Write(resp.FileContent)
|
||||
}
|
||||
files[vid] = dst
|
||||
}
|
||||
}
|
||||
defer func() {
|
||||
for _, f := range files {
|
||||
f.Close()
|
||||
}
|
||||
}()
|
||||
|
||||
type Item struct {
|
||||
vid uint32
|
||||
fileKey uint64
|
||||
}
|
||||
return doTraverseBfsAndSaving(c.env, nil, "/", false, func(entry *filer_pb.FullEntry, outputChan chan interface{}) (err error) {
|
||||
dataChunks, manifestChunks, resolveErr := filer.ResolveChunkManifest(filer.LookupFn(c.env), entry.Entry.Chunks, 0, math.MaxInt64)
|
||||
if resolveErr != nil {
|
||||
if verbose {
|
||||
fmt.Fprintf(writer, "resolving manifest chunks in %s: %v\n", util.NewFullPath(entry.Dir, entry.Entry.Name), resolveErr)
|
||||
fileredBuf := filterDeletedNeedleFromIdx(buf.Bytes())
|
||||
if vinfo.isReadOnly == false {
|
||||
index, err := idx.FirstInvalidIndex(fileredBuf.Bytes(),
|
||||
func(key types.NeedleId, offset types.Offset, size types.Size) (bool, error) {
|
||||
resp, err := volumeServerClient.ReadNeedleMeta(context.Background(), &volume_server_pb.ReadNeedleMetaRequest{
|
||||
VolumeId: volumeId,
|
||||
NeedleId: uint64(key),
|
||||
Offset: offset.ToActualOffset(),
|
||||
Size: int32(size),
|
||||
})
|
||||
if err != nil {
|
||||
return false, fmt.Errorf("to read needle meta with id %d from volume %d with error %v", key, volumeId, err)
|
||||
}
|
||||
return resp.LastModified <= cutoffFrom, nil
|
||||
})
|
||||
if err != nil {
|
||||
fmt.Fprintf(c.writer, "Failed to search for last valid index on volume %d with error %v", volumeId, err)
|
||||
} else {
|
||||
fileredBuf.Truncate(index * types.NeedleMapEntrySize)
|
||||
}
|
||||
}
|
||||
idxFilename := getVolumeFileIdFile(c.tempFolder, dataNodeId, volumeId)
|
||||
err = writeToFile(fileredBuf.Bytes(), idxFilename)
|
||||
if err != nil {
|
||||
return fmt.Errorf("failed to copy %d%s from %s: %v", volumeId, ext, vinfo.server, err)
|
||||
}
|
||||
|
||||
return nil
|
||||
}
|
||||
dataChunks = append(dataChunks, manifestChunks...)
|
||||
for _, chunk := range dataChunks {
|
||||
outputChan <- &Item{
|
||||
vid: chunk.Fid.VolumeId,
|
||||
fileKey: chunk.Fid.FileKey,
|
||||
}
|
||||
}
|
||||
return nil
|
||||
}, func(outputChan chan interface{}) {
|
||||
buffer := make([]byte, 8)
|
||||
for item := range outputChan {
|
||||
i := item.(*Item)
|
||||
util.Uint64toBytes(buffer, i.fileKey)
|
||||
files[i.vid].Write(buffer)
|
||||
}
|
||||
})
|
||||
})
|
||||
|
||||
}
|
||||
|
||||
func (c *commandVolumeFsck) oneVolumeFileIdsCheckOneVolume(tempFolder string, dataNodeId string, volumeId uint32, writer io.Writer, verbose bool, applyPurging bool) (err error) {
|
||||
type Item struct {
|
||||
vid uint32
|
||||
fileKey uint64
|
||||
cookie uint32
|
||||
path util.FullPath
|
||||
}
|
||||
|
||||
if verbose {
|
||||
fmt.Fprintf(writer, "find missing file chunks in dataNodeId %s volume %d ...\n", dataNodeId, volumeId)
|
||||
}
|
||||
|
||||
db := needle_map.NewMemDb()
|
||||
defer db.Close()
|
||||
|
||||
if err = db.LoadFromIdx(getVolumeFileIdFile(tempFolder, dataNodeId, volumeId)); err != nil {
|
||||
return
|
||||
}
|
||||
|
||||
file := getFilerFileIdFile(tempFolder, volumeId)
|
||||
fp, err := os.Open(file)
|
||||
func (c *commandVolumeFsck) readFilerFileIdFile(volumeId uint32, fn func(needleId types.NeedleId, itemPath util.FullPath)) error {
|
||||
fp, err := os.Open(getFilerFileIdFile(c.tempFolder, volumeId))
|
||||
if err != nil {
|
||||
return
|
||||
return err
|
||||
}
|
||||
defer fp.Close()
|
||||
|
||||
type Item struct {
|
||||
fileKey uint64
|
||||
cookie uint32
|
||||
path util.FullPath
|
||||
}
|
||||
|
||||
br := bufio.NewReader(fp)
|
||||
buffer := make([]byte, 16)
|
||||
item := &Item{}
|
||||
var readSize int
|
||||
var readErr error
|
||||
item := &Item{vid: volumeId}
|
||||
for {
|
||||
readSize, err = io.ReadFull(br, buffer)
|
||||
if err != nil || readSize != 16 {
|
||||
readSize, readErr = io.ReadFull(br, buffer)
|
||||
if errors.Is(readErr, io.EOF) {
|
||||
break
|
||||
}
|
||||
|
||||
if readErr != nil {
|
||||
return readErr
|
||||
}
|
||||
if readSize != 16 {
|
||||
return fmt.Errorf("readSize mismatch")
|
||||
}
|
||||
item.fileKey = util.BytesToUint64(buffer[:8])
|
||||
item.cookie = util.BytesToUint32(buffer[8:12])
|
||||
pathSize := util.BytesToUint32(buffer[12:16])
|
||||
pathBytes := make([]byte, int(pathSize))
|
||||
n, err := io.ReadFull(br, pathBytes)
|
||||
if err != nil {
|
||||
fmt.Fprintf(writer, "%d,%x%08x in unexpected error: %v\n", volumeId, item.fileKey, item.cookie, err)
|
||||
fmt.Fprintf(c.writer, "%d,%x%08x in unexpected error: %v\n", volumeId, item.fileKey, item.cookie, err)
|
||||
}
|
||||
if n != int(pathSize) {
|
||||
fmt.Fprintf(writer, "%d,%x%08x %d unexpected file name size %d\n", volumeId, item.fileKey, item.cookie, pathSize, n)
|
||||
fmt.Fprintf(c.writer, "%d,%x%08x %d unexpected file name size %d\n", volumeId, item.fileKey, item.cookie, pathSize, n)
|
||||
}
|
||||
item.path = util.FullPath(string(pathBytes))
|
||||
|
||||
item.path = util.FullPath(pathBytes)
|
||||
needleId := types.NeedleId(item.fileKey)
|
||||
if _, found := db.Get(needleId); !found {
|
||||
fmt.Fprintf(writer, "%s\n", item.path)
|
||||
|
||||
if applyPurging {
|
||||
// defining the URL this way automatically escapes complex path names
|
||||
c.httpDelete(item.path, verbose)
|
||||
}
|
||||
}
|
||||
fn(needleId, item.path)
|
||||
}
|
||||
return nil
|
||||
}
|
||||
|
||||
func (c *commandVolumeFsck) httpDelete(path util.FullPath, verbose bool) {
|
||||
func (c *commandVolumeFsck) oneVolumeFileIdsCheckOneVolume(dataNodeId string, volumeId uint32, applyPurging bool) (err error) {
|
||||
if *c.verbose {
|
||||
fmt.Fprintf(c.writer, "find missing file chunks in dataNodeId %s volume %d ...\n", dataNodeId, volumeId)
|
||||
}
|
||||
|
||||
db := needle_map.NewMemDb()
|
||||
defer db.Close()
|
||||
|
||||
if err = db.LoadFromIdx(getVolumeFileIdFile(c.tempFolder, dataNodeId, volumeId)); err != nil {
|
||||
return
|
||||
}
|
||||
if err = c.readFilerFileIdFile(volumeId, func(needleId types.NeedleId, itemPath util.FullPath) {
|
||||
if _, found := db.Get(needleId); !found {
|
||||
fmt.Fprintf(c.writer, "%s\n", itemPath)
|
||||
if applyPurging {
|
||||
c.httpDelete(itemPath)
|
||||
}
|
||||
}
|
||||
}); err != nil {
|
||||
return
|
||||
}
|
||||
return nil
|
||||
}
|
||||
|
||||
func (c *commandVolumeFsck) httpDelete(path util.FullPath) {
|
||||
req, err := http.NewRequest(http.MethodDelete, "", nil)
|
||||
|
||||
req.URL = &url.URL{
|
||||
|
|
@ -546,69 +505,66 @@ func (c *commandVolumeFsck) httpDelete(path util.FullPath, verbose bool) {
|
|||
Host: c.env.option.FilerAddress.ToHttpAddress(),
|
||||
Path: string(path),
|
||||
}
|
||||
if verbose {
|
||||
fmt.Printf("full HTTP delete request to be sent: %v\n", req)
|
||||
if *c.verbose {
|
||||
fmt.Fprintf(c.writer, "full HTTP delete request to be sent: %v\n", req)
|
||||
}
|
||||
if err != nil {
|
||||
fmt.Errorf("HTTP delete request error: %v\n", err)
|
||||
fmt.Fprintf(c.writer, "HTTP delete request error: %v\n", err)
|
||||
}
|
||||
|
||||
client := &http.Client{}
|
||||
|
||||
resp, err := client.Do(req)
|
||||
if err != nil {
|
||||
fmt.Errorf("DELETE fetch error: %v\n", err)
|
||||
fmt.Fprintf(c.writer, "DELETE fetch error: %v\n", err)
|
||||
}
|
||||
defer resp.Body.Close()
|
||||
|
||||
_, err = ioutil.ReadAll(resp.Body)
|
||||
if err != nil {
|
||||
fmt.Errorf("DELETE response error: %v\n", err)
|
||||
fmt.Fprintf(c.writer, "DELETE response error: %v\n", err)
|
||||
}
|
||||
|
||||
if verbose {
|
||||
fmt.Println("delete response Status : ", resp.Status)
|
||||
fmt.Println("delete response Headers : ", resp.Header)
|
||||
if *c.verbose {
|
||||
fmt.Fprintln(c.writer, "delete response Status : ", resp.Status)
|
||||
fmt.Fprintln(c.writer, "delete response Headers : ", resp.Header)
|
||||
}
|
||||
}
|
||||
|
||||
func (c *commandVolumeFsck) oneVolumeFileIdsSubtractFilerFileIds(tempFolder string, dataNodeId string, volumeId uint32, writer io.Writer, verbose bool) (inUseCount uint64, orphanFileIds []string, orphanDataSize uint64, err error) {
|
||||
func (c *commandVolumeFsck) oneVolumeFileIdsSubtractFilerFileIds(dataNodeId string, volumeId uint32, collection string) (inUseCount uint64, orphanFileIds []string, orphanDataSize uint64, err error) {
|
||||
|
||||
db := needle_map.NewMemDb()
|
||||
defer db.Close()
|
||||
|
||||
if err = db.LoadFromIdx(getVolumeFileIdFile(tempFolder, dataNodeId, volumeId)); err != nil {
|
||||
if err = db.LoadFromIdx(getVolumeFileIdFile(c.tempFolder, dataNodeId, volumeId)); err != nil {
|
||||
err = fmt.Errorf("failed to LoadFromIdx %+v", err)
|
||||
return
|
||||
}
|
||||
|
||||
filerFileIdsData, err := os.ReadFile(getFilerFileIdFile(tempFolder, volumeId))
|
||||
if err != nil {
|
||||
return
|
||||
}
|
||||
|
||||
dataLen := len(filerFileIdsData)
|
||||
if dataLen%8 != 0 {
|
||||
return 0, nil, 0, fmt.Errorf("filer data is corrupted")
|
||||
}
|
||||
|
||||
for i := 0; i < len(filerFileIdsData); i += 8 {
|
||||
fileKey := util.BytesToUint64(filerFileIdsData[i : i+8])
|
||||
db.Delete(types.NeedleId(fileKey))
|
||||
if err = c.readFilerFileIdFile(volumeId, func(nId types.NeedleId, itemPath util.FullPath) {
|
||||
if err = db.Delete(nId); err != nil && *c.verbose {
|
||||
fmt.Fprintf(c.writer, "failed to nm.delete %s(%+v): %+v", itemPath, nId, err)
|
||||
}
|
||||
inUseCount++
|
||||
}); err != nil {
|
||||
err = fmt.Errorf("failed to readFilerFileIdFile %+v", err)
|
||||
return
|
||||
}
|
||||
|
||||
var orphanFileCount uint64
|
||||
db.AscendingVisit(func(n needle_map.NeedleValue) error {
|
||||
// fmt.Printf("%d,%x\n", volumeId, n.Key)
|
||||
orphanFileIds = append(orphanFileIds, fmt.Sprintf("%d,%s00000000", volumeId, n.Key.String()))
|
||||
if err = db.AscendingVisit(func(n needle_map.NeedleValue) error {
|
||||
orphanFileIds = append(orphanFileIds, fmt.Sprintf("%s:%d,%s00000000", collection, volumeId, n.Key.String()))
|
||||
orphanFileCount++
|
||||
orphanDataSize += uint64(n.Size)
|
||||
return nil
|
||||
})
|
||||
}); err != nil {
|
||||
err = fmt.Errorf("failed to AscendingVisit %+v", err)
|
||||
return
|
||||
}
|
||||
|
||||
if orphanFileCount > 0 {
|
||||
pct := float64(orphanFileCount*100) / (float64(orphanFileCount + inUseCount))
|
||||
fmt.Fprintf(writer, "dataNode:%s\tvolume:%d\tentries:%d\torphan:%d\t%.2f%%\t%dB\n",
|
||||
fmt.Fprintf(c.writer, "dataNode:%s\tvolume:%d\tentries:%d\torphan:%d\t%.2f%%\t%dB\n",
|
||||
dataNodeId, volumeId, orphanFileCount+inUseCount, orphanFileCount, pct, orphanDataSize)
|
||||
}
|
||||
|
||||
|
|
@ -623,15 +579,15 @@ type VInfo struct {
|
|||
isReadOnly bool
|
||||
}
|
||||
|
||||
func (c *commandVolumeFsck) collectVolumeIds(commandEnv *CommandEnv, verbose bool, writer io.Writer) (volumeIdToServer map[string]map[uint32]VInfo, err error) {
|
||||
func (c *commandVolumeFsck) collectVolumeIds() (volumeIdToServer map[string]map[uint32]VInfo, err error) {
|
||||
|
||||
if verbose {
|
||||
fmt.Fprintf(writer, "collecting volume id and locations from master ...\n")
|
||||
if *c.verbose {
|
||||
fmt.Fprintf(c.writer, "collecting volume id and locations from master ...\n")
|
||||
}
|
||||
|
||||
volumeIdToServer = make(map[string]map[uint32]VInfo)
|
||||
// collect topology information
|
||||
topologyInfo, _, err := collectTopologyInfo(commandEnv, 0)
|
||||
topologyInfo, _, err := collectTopologyInfo(c.env, 0)
|
||||
if err != nil {
|
||||
return
|
||||
}
|
||||
|
|
@ -656,17 +612,16 @@ func (c *commandVolumeFsck) collectVolumeIds(commandEnv *CommandEnv, verbose boo
|
|||
isReadOnly: true,
|
||||
}
|
||||
}
|
||||
if *c.verbose {
|
||||
fmt.Fprintf(c.writer, "dn %+v collected %d volumes and locations.\n", dataNodeId, len(volumeIdToServer[dataNodeId]))
|
||||
}
|
||||
}
|
||||
})
|
||||
|
||||
if verbose {
|
||||
fmt.Fprintf(writer, "collected %d volumes and locations.\n", len(volumeIdToServer))
|
||||
}
|
||||
return
|
||||
}
|
||||
|
||||
func (c *commandVolumeFsck) purgeFileIdsForOneVolume(volumeId uint32, fileIds []string, writer io.Writer) (err error) {
|
||||
fmt.Fprintf(writer, "purging orphan data for volume %d...\n", volumeId)
|
||||
func (c *commandVolumeFsck) purgeFileIdsForOneVolume(volumeId uint32, fileIds []string) (err error) {
|
||||
fmt.Fprintf(c.writer, "purging orphan data for volume %d...\n", volumeId)
|
||||
locations, found := c.env.MasterClient.GetLocations(volumeId)
|
||||
if !found {
|
||||
return fmt.Errorf("failed to find volume %d locations", volumeId)
|
||||
|
|
@ -693,7 +648,7 @@ func (c *commandVolumeFsck) purgeFileIdsForOneVolume(volumeId uint32, fileIds []
|
|||
for results := range resultChan {
|
||||
for _, result := range results {
|
||||
if result.Error != "" {
|
||||
fmt.Fprintf(writer, "purge error: %s\n", result.Error)
|
||||
fmt.Fprintf(c.writer, "purge error: %s\n", result.Error)
|
||||
}
|
||||
}
|
||||
}
|
||||
|
|
@ -701,6 +656,13 @@ func (c *commandVolumeFsck) purgeFileIdsForOneVolume(volumeId uint32, fileIds []
|
|||
return
|
||||
}
|
||||
|
||||
func (c *commandVolumeFsck) getCollectFilerFilePath() string {
|
||||
if *c.collection != "" {
|
||||
return fmt.Sprintf("%s/%s", c.bucketsPath, *c.collection)
|
||||
}
|
||||
return "/"
|
||||
}
|
||||
|
||||
func getVolumeFileIdFile(tempFolder string, dataNodeid string, vid uint32) string {
|
||||
return filepath.Join(tempFolder, fmt.Sprintf("%s_%d.idx", dataNodeid, vid))
|
||||
}
|
||||
|
|
|
|||
Loading…
Reference in a new issue